- Banaina Airport
- Binuang Airstrip
- Buduk Kabul Airstrip
- Bunyu Airport
- Datah Dian Airstrip
- Juwata International Airport / Suharnoko Harbani AFB
- Long Alango Airstrip
- Long Apung Airport
- Long Mawang Airport
- Long Rungan
- Lumbis Airstrip
- Malinau Heliport
- Nain Baru Airstrip
- Nunukan Airport
- Robert Atty Bessing
- Tanjung Harapan Airport
- Yuvai Semaring Airport